public interface DatabaseModule extends BioModule
LOG_DIR, MAIN_SCRIPT_PREFIX, NO_VERSION, OUTPUT_DIR, RES_DIR, TEMP_DIR
Modifier and Type | Method and Description |
---|---|
File |
getDB()
Return database directory, if multiple databases are configured, they must share a common parent directory and
the common parent directory is returned by this method.
|
checkDependencies, cleanUp, executeTask, getAlias, getDockerImageName, getDockerImageOwner, getDockerImageTag, getID, getInputFiles, getLogDir, getMetadata, getModuleDir, getOutputDir, getPostRequisiteModules, getPreRequisiteModules, getPropDefault, getResourceDir, getSummary, getTempDir, init, isValidInputModule, setAlias, version
File getDB() throws ConfigPathException, ConfigNotFoundException, DockerVolCreationException
ConfigPathException
- if path is defined but does not existsConfigNotFoundException
- if DB property is undefined and the default DB is not included in the module
runtime envDockerVolCreationException