| Package | Description |
|---|---|
| biolockj.node.r16s |
Package contains RDP and QIIME specific
OtuNodes that represent the OTUs (operational taxonomy
units) assigned by 16S ClassifierModules |
| biolockj.node.wgs |
Package contains Kraken, Kraken2, and MetaPhlAn2 specific
OtuNodes that represent the OTUs
(operational taxonomy units) assigned by WGS ClassifierModules |
| Modifier and Type | Class and Description |
|---|---|
class |
QiimeNode
This class holds the OTU assignments from one line of
QiimeClassifier output. |
class |
RdpNode
This class represents one line of
RdpClassifier output. |
| Modifier and Type | Class and Description |
|---|---|
class |
Kraken2Node
This class represents one line of
Kraken2Classifier output. |
class |
KrakenNode
This class represents one line of
KrakenClassifier output. |
class |
MetaphlanNode
This class represents one line of
Metaphlan2Classifier output. |