Package biolockj.node

Package biolockj.node contains core classes instantiated by the ParserModule to hold Sample ID-(OTU name/count) data read in from ClassifierModule output.

See: Description

Interface Summary

Interface	Description
OtuNode	Classes that implement this interface store taxonomy assignment info for one sequence, as output by a classifier.

Class Summary

Class	Description
JsonNode	Each JsonNode holds an OTU, count, and link to its parent node.
OtuNodeImpl	The default implementation of OtuNode is also the superclass for all WGS and 16S OtuNode classes.
ParsedSample	ParserModules create and store one ParsedSample, with OTU assignments and counts, for each sample.

Package biolockj.node Description

Package biolockj.node contains core classes instantiated by the ParserModule to hold Sample ID-(OTU name/count) data read in from ClassifierModule output.