| Package | Description |
|---|---|
| biolockj.module.classifier.r16s |
This package contains RDP and QIIME classifier modules that assign taxonomy to 16s sequences.
Output file formats are classifier specific so classifier requires a unique post-requisite ParserModule. |
| Class and Description |
|---|
| QiimeClassifier
This BioModule generates the bash script used to create QIIME summary scripts, taxonomy-level reports, and add alpha
diversity metrics (if configured) to the metadata file.
For a complete list of available metrics, see: http://scikit-bio.org/docs/latest/generated/skbio.diversity.alpha.html |