biolockj.util

Class OtuUtil.OtuCountLine

java.lang.Object

biolockj.util.OtuUtil.OtuCountLine

Enclosing class:

OtuUtil

public static class OtuUtil.OtuCountLine
extends Object

This inner class is used to hold a single line from an OTU count file.

Constructor Summary

Constructors

Constructor and Description
OtuCountLine(String line) Each OTU count file line has 2 parts: OTU Name and OTU Count

Method Summary

Modifier and Type	Method and Description
Long	getCount() Get OTU count
String	getOtu() Get OTU name

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

OtuCountLine

public OtuCountLine(String line)
             throws OtuFileException

Each OTU count file line has 2 parts: OTU Name and OTU Count

Parameters:

line - OTU count file line

Throws:

OtuFileException - if errors occur

Method Detail

getCount

public Long getCount()

Get OTU count

Returns:

OTU count

getOtu

public String getOtu()

Get OTU name

Returns:

OTU name