Uses of Class
biolockj.exception.ConfigViolationException

Packages that use ConfigViolationException

Package	Description
biolockj.util	Static utilities centralize and organize reusable core methods.

Uses of ConfigViolationException in biolockj.util

Methods in biolockj.util that throw ConfigViolationException

Modifier and Type	Method and Description
static String	PathwayUtil.getHn2Type(File file) Humann2 classifier outputs 3 types of files: "pAbund" "pCovg" "geneFam" This method returns the type included in the given file name.
static File	PathwayUtil.getPathwayCountFile(File dir, File hn2OutputFile, String prefix) Return a pathway abundance file path in the given dir with the given prefix (if provided).
static boolean	MetaUtil.hasMetaColToSampleIdMap()
static boolean	MetaUtil.setSampleId(File file, String sampleId)
static boolean	MetaUtil.setSampleId(String filename, String sampleId)