biolockj.exception

Class RequiredRPackageException

java.lang.Object

java.lang.Throwable

java.lang.Exception

biolockj.exception.BioLockJException

biolockj.exception.RequiredRPackageException

All Implemented Interfaces:

Serializable

public class RequiredRPackageException
extends BioLockJException

See Also:

Serialized Form

Field Summary

Fields inherited from class biolockj.exception.BioLockJException

RETURN

Constructor Summary

Constructors

Constructor and Description
RequiredRPackageException(Set<String> names, Map<String,String> repos) Create exception based on which R packages are missing, and the URLs of repos to download them from.
RequiredRPackageException(String rpackage) Create exception based on which R package is missing.
RequiredRPackageException(String rpackage, String packageRepo) Create exception based on which R package is missing, and the URL to download it from.

Method Summary

Methods inherited from class java.lang.Throwable

addSuppressed, fillInStackTrace, getCause, getLocalizedMessage, getMessage, getStackTrace, getSuppressed, initCause, printStackTrace, printStackTrace, printStackTrace, setStackTrace, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

RequiredRPackageException

public RequiredRPackageException(String rpackage)

Create exception based on which R package is missing.

Parameters:

rpackage - name of an R package that is required but cannot be loaded

RequiredRPackageException

public RequiredRPackageException(String rpackage,
                                 String packageRepo)

Create exception based on which R package is missing, and the URL to download it from.

Parameters:

rpackage - name of an R package that is required but cannot be loaded

packageRepo - url of repository that from which the package may be installed.

RequiredRPackageException

public RequiredRPackageException(Set<String> names,
                                 Map<String,String> repos)

Create exception based on which R packages are missing, and the URLs of repos to download them from.

Parameters:

names - Set of Strings given one or more names of packages that are required but cannot be loaded

repos - Map of package names to url where the package could be installed from.